Power, Sex, Suicide: Mitochondria and the Meaning of Life (61 page)

Read Power, Sex, Suicide: Mitochondria and the Meaning of Life Online

Authors: Nick Lane

Tags: #Science, #General

BOOK: Power, Sex, Suicide: Mitochondria and the Meaning of Life
4.15Mb size Format: txt, pdf, ePub

Keilin, D.
The History of Cell Respiration and Cytochrome
. Cambridge University Press, Cambridge, UK, 1966.

—— Cytochrome and respiratory enzymes.
Proceedings of the Royal Society of London B: Biological Sciences
104:
206–252; 1929.

Lahiri, S. Historical perspectives of cellular oxygen sensing and responses to hypoxia.
Journal of Applied Physiology
88:
1467–1473; 2000.

Warburg, O.
The Oxygen-Transferring Ferment of Respiration
. In
Nobel Lectures, Physiology or Medicine 1922–1941
, Nobel Lecture, 1931. Elsevier Publishing Company, Amsterdam, Holland, 1965 (and available online at the Nobel e-Museum).

Fermentation

Buchner, E.
Cell-Free Fermentation
. In
Nobel Lectures, Chemistry 1901–1921
, Nobel Lecture, 1907. Elsevier Publishing Company, Amsterdam, Holland, 1966 (and available online at the Nobel e-Museum).

Discovery of ATP

Engelhardt, W. A. Life and Science. Autobiography.
Annual Review of Biochemistry
51:
1–19; 1982.

Fruton, J.
Proteins, Enzymes, Genes: The Interplay of Chemistry and Biology
. Yale University Press, New Haven, USA, 1999.

Gest, H. Landmark discoveries in the trail from chemistry to cellular biochemistry, with particular reference to mileposts in research on bioenergetics.
Biochemistry and Molecular Biology Education
30:
9–13; 2002.

Rate of ATP production

Rich, P. The cost of living.
Nature
421:
583; 2003.

The elusive squiggle

Gest, H. Landmark discoveries in the trail from chemistry to cellular biochemistry, with particular reference to mileposts in research on bioenergetics.
Biochemistry and Molecular Biology Education
30:
9–13; 2002.

Harold, F. M. The 1978 Nobel Prize in Chemistry.
Science
202:
1174–1176; 1978.

Peter Mitchell and chemiosmotics

Chappell, J. B. Nobel Prize: Chemistry.
Trends in Biochemical Sciences
4
: N3–N4; 1979.

Harold, F. M. The 1978 Nobel Prize in Chemistry.
Science
202:
1174–1176; 1978.

Matzke, M. A, and Matzke, A. J. M. Kuhnian revolutions in biology: Peter Mitchell and the chemiosmotic theory.
Bioessays
19:
91–93; 1997.

Mitchell, P.
David Keilin’s Respiratory Chain Concept and its Chemiosmotic Consequences
.

In
Nobel Lectures in Chemistry 1971–1980
, Nobel Lecture, 1978, Sture Forsén (ed.), World Scientific Publishing Company, Singapore, 1993 (and available online at the Nobel e-Museum).

—— Coupling of phosphorylation to electron and hydrogen transfer by a chemi-osmotic type of mechanism.
Nature
191:
144–148; 1961.

Orgel, L. E. Are you serious, Dr Mitchell?
Nature
402:
17; 1999.

Prebble, J. Peter Mitchell and the ox phos wars.
Trends in Biochemical Sciences
27:
209–212; 2002.

Schatz, G.
Efraim Racker
. In
Biographical Memoirs
, vol. 70. National Academies Press, Washington DC, USA, 1996.

The Jagendorf-Uribe experiment

Jagendorf, A. T., and Uribe, E. ATP formation caused by acid-base transition of spinach chloroplasts.
Proceedings of the National Academy of Sciences USA
55:
170–177; 1966.

—— Chance, luck and photosynthesis research: An inside story.
Photosynthesis Research
57:
215–229; 1998.

Structure of the ATPase

Walker, J. E.
ATP Synthesis by Rotary Catalysis
. In
Nobel Lectures in Chemistry 1996–2000
, Nobel Lecture, 1997, Ingmar Grenthe (ed.), World Scientific Publishing Company, Singapore, 2003 (and available online at the Nobel e-Museum).

Wider function of the proton current

Harold, Franklin M.
The Way of the Cell. Molecules, Organisms, and the Order of Life
. Oxford University Press, New York, USA, 2001.

—— Gleanings of a chemiosmotic eye.
Bioessays
23:
848–855; 2001.

Origin of life

Martin, W., and Russell, M. J. On the origins of cells: A hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells.
Philosophical Transactions of the Royal Society of London B: Biological Sciences
358:
59–85; 2003.

Russell, M. J., and Hall, A. J. The emergence of life from iron monosulphide bubbles at a submarine hydrothermal redox and pH front.
Journal of the Geological Society of London
154:
377–402; 1997.

—— —— Cairns-Smith, A. G., and Braterman, P. S. Submarine hot springs and the origin of life.
Nature
336:
117; 1988.

Wächtershäuser, G. Groundworks for an evolutionary biochemistry: The iron-sulphur world.
Progress in Biophysics and Molecular Biology
58:
85–201; 1992.

Part 3
General texts

Dennett, Daniel.
Darwin’s Dangerous Idea
. Penguin, London, UK, 1995.

Maynard Smith, John, and Szathmáry, Eörs.
The Origins of Life
. Oxford University Press, Oxford, UK, 1999.

Monod, Jacques.
Chance and Necessity
. Penguin, London, UK, 1997 (first published in English 1971).

Prescott, L. M., Harley, J. P., and Klein, D. A.
Microbiology
(5th edition). McGraw-Hill Education, Maidenhead, UK, 2001.

Ridley, Mark.
Mendel’s Demon
. Weidenfeld & Nicolson, London, UK, 2000.

Speed of bacterial proliferation

Jensen, P. R., Loman, L., Petra, B., van der Weijden, C., and Westerhoff, H. V. Energy buffering of DNA structure fails when
Escherichia coli
runs out of substrate.
Journal of Bacteriology
177:
3420–3426; 1995.

Koedoed, S., Otten, M. F., Koebmann, B. J., Bruggeman, F. J., Bakker, B. M., Snoep, J. L., Krab, K., van Spanning, R. J. M., van Verseveld, H. W., Jensen, P. R., Koster, J. G., and Westerhoff, H. V. A turbo engine with automatic transmission? How to marry chemicomotion to the subtleties and robustness of life.
Biochimica et Biophysica Acta
1555:
75–82; 2002.

O’Farrell, P. H. Cell cycle control: Many ways to skin a cat.
Trends in Cell Biology
2:
159–163; 1992.

Genome size of soil bacteria

Konstantinidis, K. T., and Tiedje, J. M. Trends between gene content and genome size in prokaryotic species with larger genomes.
Proceedings of the National Academy of Sciences USA
101:
3160–3165; 2004.

Genome of
Rickettsia

Andersson, J. O., and Andersson, S. G. A century of typhus, lice and
Rickettsia
.
Research in Microbiology
151:
143–150; 2000.

Andersson, S. G., Zomorodipour, A., Andersson, J. O., Sicheritz-Ponten, T., Alsmark, U. C., Podowski, R. M., Naslund, A. K., Eriksson, A. S., Winkler, H. H., and Kurland, C. G. The genome sequence of
Rickettsia prowazekii
and the origin of mitochondria.
Nature
396:
133–140; 1998.

Gross, L. How Charles Nicolle of the Pasteur Institute discovered that epidemic typhus is transmitted by lice: Reminiscences from my years at the Pasteur Institute in Paris.
Proceedings of the National Academy of Sciences USA
93:
10539–10540; 1996.

Gene loss and lateral gene transfer

Frank, A. C., Amiri, H., and Andersson, S. G. E. Genome deterioration: Loss of repeated sequences and accumulation of junk DNA.
Genetica
115:
1–12; 2002.

Vellai, T., Takács, K., and Vida, G. A new aspect to the origin and evolution of eukaryotes.
Journal of Molecular Evolution
46:
499–507; 1998.

—— Vida, G. The origin of eukaryotes: The difference between prokaryotic and eukaryotic cells.
Proceedings of the Royal Society of London B: Biological Sciences
266:
1571–1577; 1999.

Difficulties in defining bacterial ‘species’

Doolittle, W. F., Boucher, Y., Nesbo, C. L, Douady, C. J., Andersson, J. O., and Roger, A. J. How big is the iceberg of which organellar genes in nuclear genomes are but the tip?
Philosophical Transactions of the Royal Society of London B: Biological Sciences
358:
39–58; 2003.

Martin, W. Woe is the Tree of Life. In J. Sapp (ed.),
Microbial Phylogeny and Evolution: Concepts and Controversies
. Oxford University Press, New York, USA, 2005.

Maynard Smith, J., Feil, E. J., and Smith, N. H. Population structure and evolutionary dynamics of pathogenic bacteria.
Bioessays
22:
1115–1122; 2000.

Spratt, B. G., Hanage, W. P., and Feil, E. J. The relative contributions of recombination and point mutation to the diversification of bacterial clones.
Current Opinion in Microbiology
4:
602–606; 2001.

Respiratory efficiency and genome size

Konstantinidis, K., and Tiedje, J. M. Trends between gene content and genome size in prokaryotic species with larger genomes.
Proceedings of the National Academy of Sciences USA
101:
3160–3165; 2004.

Vellai, T., Takács, K., and Vida, G. A new aspect to the origin and evolution of eukaryotes.
Journal of Molecular Evolution
46:
499–507; 1998.

Giant bacteria

Schulz, H. N., Brinkhoff, T., Ferdelman, T. G., Hernández Mariné, M., Teske, A., and Jørgensen, B. B. Dense populations of a giant sulfur bacterium in Namibian shelf sediments.
Science
284:
493–495; 1999.

Bacteria without cell walls

Ruepp, A., Graml, W., Santos-Martinez, M. L., Koretke, K. K., Volker, C., Mewes, H. W., Frishman, D., Stocker, S., Lupas, A. N., and Baumeister, W. The genome sequence of the thermoacidophilic scavenger
Thermoplasma acidophilum
.
Nature
407:
508–513; 2000.

Taylor-Robinson, D.
Mycoplasma genitalium
—an update.
International Journal of STD and AIDS
13:
145–151; 2002.

Gene transfer to the nucleus

Bensasson, D., Feldman, M. W., and Petrov, D. A. Rates of DNA duplication and mitochondrial DNA insertion in the human genome.
Journal of Molecular Evolution
57:
343–354; 2003.

Huang, C. Y., Ayliffe, M. A., and Timmis, J. N. Direct measurement of the transfer rate of chloroplast DNA into the nucleus.
Nature
422:
72–76; 2003.

Martin, W. Gene transfer from organelles to the nucleus: Frequent and in big chunks.
Proceedings of the National Academy of Sciences USA
100:
8612–8614; 2003.

Turner, C., Killoran, C., Thomas, N. S., Rosenberg, M., Chuzhanova, N. A., Johnston, J., Kemel, Y., Cooper, D. N., and Biesecker, L. G. Human genetic disease caused by de novo mitochondrial-nuclear DNA transfer.
Human Genetics
112:
303–309; 2003.

Origin of the nucleus

Martin, W. A. briefly argued case that mitochondria and plastids are descendents of endosymbionts but that the nuclear compartment is not.
Proceedings of the Royal Society of London B: Biological Sciences
266:
1387–1395; 1999.

Berry, S. Endosymbiosis and the design of eukaryotic electron transport.
Biochimica et Biophysica Acta
1606:
57–72; 2003.

Fungi as the first eukaryotes

Other books

Gullstruck Island by Hardinge, Frances
When the Heavens Fall by Gilbert Morris
El honorable colegial by John Le Carré
Five Days by Douglas Kennedy
Tigerman by Nick Harkaway
White Thunder by Thurlo, Aimee
Unclaimed by Sara Humphreys
Saved by the Celebutante by Kirsty McManus