Spillover: Animal Infections and the Next Human Pandemic (66 page)

Read Spillover: Animal Infections and the Next Human Pandemic Online

Authors: David Quammen

Tags: #Science, #Life Sciences, #Microbiology

BOOK: Spillover: Animal Infections and the Next Human Pandemic
9.45Mb size Format: txt, pdf, ePub

250.
the word is
“questing”
: Ostfeld (2011), 23.

251.
Ostfeld and others call
“reservoir competence”
: Ostfeld (2011), 12.

258.

We know that walking into a small woodlot

: Ostfeld (2011), 9.

258.
Some people take “All life is connected” to be
: Ostfeld (2011), 6–7.

258.
a sort of cystlike stage known as a
“round body”
: Margulis et al. (2009), 52.

VI. Going Viral

265.

the sap of leaves infected with tobacco mosaic disease

: Levine (1992), 2.

267.

encouraged by the study of the so-called ‘filterable virus’ agents

: Zinsser (1934), 63.

267.

Here, as in bacterial disease

: Zinsser (1934), 64.

268.

a piece of bad news wrapped up in a protein

: Quoted in Crawford (2000), 6.

273.

pain, redness, and slight swelling
” around the bite
: Sabin and Wright (1934), 116.

273.
They called it simply “the B virus”
: Sabin and Wright (1934), 133.

278.

no case
” of human infection with the virus
: Engel et al. (2002), 792.

288.

a virus in search of a disease

: Weiss (1988), 497.

295.
the most “efficient” parasite, in Pasteur’s view
: Pasteur’s view as summarized and reaffirmed by Rene Dubos, quoted in Ewald (1994), 188–89.

295.

a more perfect mutual tolerance

: Zinsser (1934), 61.

295.

In general terms, where two organisms have developed

: Burnet (1940), 37.

296.

A disease organism that kills its host quickly

: McNeill (1976), 9.

297.

started jumping up and down, biting other animals

: Quoted in ProMED-mail post, April 22, 2011.

297.

He barked like a dog,
” his wife recalled later
: Quoted in ProMED-mail post, April 1, 2011.

298.
Austin was an “ardent acclimatizer”
: Fenner and Ratcliffe (1965), 17.

299.
causing what was called a “spectacular epizootic”
: Fenner and Ratcliffe (1965), 276.

301.

Laboratory experiments showed that all field strains

: Fenner (1983), 265.

304.

weave together
” the two approaches
: Anderson and May (1979), 361.

304.

unsupported statements
” in medical and ecological textbooks
: Anderson and May (1982), 411.

306.

Our major conclusion,
” wrote Anderson and May
: Anderson and May (1982), 424.

VII. Celestial Hosts

315.

Pigs are a common host for the virus

:
New Straits Times,
January 7, 1999.

316.

It became known as a one-mile barking cough

: Hume Field was the expert, quoted in a
60 Minutes
(of Australia) television interview.

327.

touching dead animals
” looked like it might be important
: Montgomery et al. (2008), 1529, Table 2.

328.

increases the risk for wider spread

: Gurley et al. (2007), 1036.

331.

Owners viewed the fruit bats as a nuisance

: Luby et al. (2006), 1892.

344.

the revenge of the rain forest

: Preston (1994), 289.

350.
Do bats have a different “set point”
: Calisher et al. (2006), 536.

351.

Emphasis, sometimes complete emphasis, on nucleotide sequence

: Calisher et al. (2006), 541.

351.

we are simply waiting for the next

: Calisher et al. (2006), 540.

351.

The natural reservoir hosts of these viruses have not yet been identified

: Calisher et al. (2006), 539.

356.

is only one of many such cave populations

: Towner et al. (2009), 2.

372.

Patient C was the father of a 4-year-old girl

: Leroy et al. (2009), 5.

372.

Thus, virus transmission may have occurred

: Leroy et al. (2009), 6.

373.

In fact, it is highly likely that several other persons

: Leroy et al. (2009), 5.

VIII. The Chimp and the River

385.

profoundly depressed
” in number
: Gottlieb et al. (1981), 251.

387.

strikingly similar to the syndrome of immunodeficiency

: Pitchenik et al. (1983), 277.

387.
written about as the man who “carried the virus out of Africa”
: e.g., Wikipedia, “Gaëtan Dugas,” citing Auerbach et al. (1984), although Auerbach et al. do not make that assertion.

387.
vain but charming, even “gorgeous” in some eyes
:
Shilts (1987), 47.

388.

I’ve got gay cancer

: Shilts (1987), 165.

388.

Although the cause of AIDS is unknown

: Auerbach et al. (1984), 490.

388.
to the more resonant “Patient Zero” of his book
: Shilts (1987), 23.

389.

I’d better go home to die

: Shilts (1987), 6.

391.

AIDS could not be caused by a conventional bacterium

: Montagnier (2000), 42.

393.

more than 4000 individuals in the world

: Levy et al. (1984), 840.

393.

Our data cannot reflect a contamination

: Levy et al. (1984), 842.

396.

In 1985, the highest rates of HIV were reported

: Essex and Kanki (1988), 68.

396.

must have evolved mechanisms

: Essex and Kanki (1988), 68.

396.

not close enough to make it likely that SIV

: Essex and Kanki (1988), 69.

399.
HUMAN AIDS VIRUS NOT FROM MONKEYS
: Mulder (1988), 396.

399.
sampled by the Japanese team, because it was “of Kenyan origin”
: Fukasawa et al. (1988), 457.

401.
revealed that the virus was “endemic” among them
: Murphey-Corb et al. (1986), 437.

402.

These results suggest that SIV
sm
has infected macaques

: Hirsch et al. (1989), 389.

414.
with material direct from a “vaccinal sore”
: Willrich (2011), 181.

415.

The origin of the AIDS virus is of no importance

: Quoted in Curtis (1992), 21.

415.

It’s distracting, it’s nonproductive, it’s confusing

: Quoted in Curtis (1992), 21.

416.

The controversy surrounding the source of the Nile

: Hooper (1999), 4.

421.

Our estimation of divergence times

: Worobey et al. (2008), 663.

423.

the most persuasive evidence yet

: Weiss and Wrangham (1999), 385.

428.

We show here that the SIV
cpzPtt
strain that gave rise

: Keele at al. (2006), 526.

428.

In humans, direct exposure to animal blood

: Hahn et al. (2000), 611.

428.

The likeliest route of chimpanzee-to-human transmission

: Sharp and Hahn (2010), 2492.

429.

a hard mission field,
” according to one Swedish missionary
: Quoted in Martin (2002), 25.

430.

a low-risk type of prostitution

: Pepin (2011), 90.

437.

Until recently, the Bakweles have been using chimps

: From the typewritten, unpublished report of my anonymous source in Yokadouma.

464.

survived their own AIDS-like pandemic

: Cohen (2002), 15.

477.

that SIV
cpz
has a substantial negative impact

: Keele et al. (2009), 515.

479.

The Congo contains various health institutions

: Beheyt (1953), quoted in Pepin (2011), 164.

479.

The large number of patients and the small quantity of syringes

: Beheyt (1953), quoted in Pepin (2011), 164.

481.

consisted of thousands of asymptomatic free women

: Pepin (2011), 161.

485.
“there must have been a very effective amplification mechanism”
: Pepin (2011), 196.

IX. It Depends

496.

From the ecological point of view an outbreak

: Berryman (1987), 3.

497.

When
Homo sapiens
passed the six-billion mark

: Wilson (2002), 86.

498.

seems to imply a dominant force

: Myers (1993), 240.

512.

The first criterion is the most obvious

: Burke (1998), 7.

 

BIBLIOGRAPHY

Abraham, Thomas. 2007.
Twenty-First Century Plague: The Story of SARS.
Baltimore: The Johns Hopkins University Press.

AbuBakar, Sazaly, Li-Yen Chang, A. R. Mohd Ali, S. H. Sharifah, Khatijah Yusoff, and Zulkeflie Zamrod. 2004. “Isolation and Molecular Identification of Nipah Virus from Pigs.”
Emerging Infectious Diseases,
10 (12).

Aguirre, A. Alonso, Richard S. Ostfeld, Gary M. Tabor, Carol House, and Mary C. Pearl, eds. 2002.
Conservation Medicine: Ecological Health in Practice.
Oxford: Oxford University Press.

Alibek, Ken. 1999.
Biohazard: The Chilling True Story of the Largest Covert Biological Weapons Program in the World—Told from the Inside by the Man Who Ran It.
With Stephen Handelman. New York: Delta/Dell Publishing.

Anderson, Roy M., and Robert M. May. 1978. “Regulation and Stability of Host-Parasite Population Interactions.”
Journal of Animal Ecology,
47.

———
. 1979. “Population Biology of Infectious Diseases: Part I.”
Nature,
280.

———
. 1980. “Infectious Diseases and Populations of Forest Insects.”
Science
, 210.

———
. 1982. “Coevolution of Hosts and Parasites.”
Parasitology,
85.

———
. 1992.
Infectious Diseases of Humans: Dynamics and Control.
Oxford: Oxford University Press.

Arricau-Bouvery, Nathalie, and Annie Rodolakis. 2005. “Is Q Fever an Emerging or Re-emerging Zoonosis?”
Veterinary Research,
36.

Auerbach, D. M., W. W. Darrow, H. W. Jaffe, and J. W. Curran. 1984. “Cluster of Cases of the Acquired Immune Deficiency Syndrome. Patients Linked by Sexual Contact.”
The American Journal of Medicine,
76 (3).

Bacon, Rendi Murphree, Kiersten J. Kugeler, and Paul S. Mead. 2008. “Surveillance for Lyme Disease—United States, 1992–2006.”
Morbidity and Mortality Weekly Report,
57.

Bailes, Elizabeth, Feng Gao, Frederic Biboilet-Ruche, Valerie Courgnaud, Martine Peeters, Preston A. Marx, Beatrice H. Hahn, and Paul M. Sharp. 2003. “Hybrid Origin of SIV in Chimpanzees.”
Science,
300.

Baize, S., E. M. Leroy, M. C. Georges-Courbot, J. Lansoud-Soukate, P. Debré, S. P. Fisher-Hoch, J. B. McCormick, and A. J. Georges. 1999. “Defective Humoral Responses and Extensive Intravascular Apoptosis are Associated with Fatal Outcome in Ebola Virus-Infected Patients.”
Nature Medicine,
5 (4).

Barbosa, Pedro, and Jack C. Schultz, eds. 1987.
Insect Outbreaks.
San Diego: Academic Press.

Barin, F., S. M’Boup, F. Denis, P. Kanki, J. S. Allan, T. H. Lee, and M. Essex. 1985. “Serological Evidence for Virus Related to Simian T-Lymphotropic Retrovirus III in Residents of West Africa.”
The Lancet,
2.

Barré-Sinoussi, F., J. C. Cherrmann, F. Rey, M. T. Nugeyre, S. Chamaret, J. Gruest, C. Dauguet, et al. 1983. “Isolation of a T-Lymphotropic Retrovirus from a Patient at Risk for Acquired Immune Deficiency Syndrome (AIDS).”
Science,
220.

Barré-Sinoussi, Françoise. 2003a. “The Early Years of HIV Research: Integrating Clinical and Basic Research.”
Nature Medicine,
9 (7).

———
. 2003b. “Barré-Sinoussi Replies.”
Nature Medicine,
9 (7).

Barry, John M. 2005.
The Great Influenza: The Epic Story of the Deadliest Plague in History.
New York: Penguin Books.

Beaudette, F. R., ed. 1955.
Psittacosis: Diagnosis, Epidemiology and Control.
New Brunswick, NJ: Rutgers University Press.

Beheyt, P. 1953. “
Contribution à l’étude des hepatites en Afrique. L’hépatite épidémique et l’hépatite par inoculation.” Annales de la Société Belge de Médicine Tropicale.

Bermejo, Magdalena, José Domingo Rodríguez-Teijeiro, Germán Illera, Alex Barroso, Carles Vilà, and Peter D. Walsh. 2006. “Ebola Outbreak Killed 5000 Gorillas.”
Science,
314.

Bernoulli, Daniel. 2004. “An Attempt at a New Analysis of the Mortality Caused by Smallpox and of the Advantages of Inoculation to Prevent It.” Reprinted in
Reviews in Medical Virology,
14.

Berryman, Alan A. 1987. “The Theory and Classification of Outbreaks.” In
Insect Outbreaks,
ed.
P. Barbosa and J. C. Schultz.
San Diego: Academic Press.

Biek, Roman, Peter D. Walsh, Eric M. Leroy, and Leslie A. Real. 2006. “Recent Common Ancestry of Ebola Zaire Virus Found in a Bat Reservoir.”
PLoS Pathogens,
2 (10).

Blum, L. S., R. Khan, N. Nahar, and R. F. Breiman. 2009. “In-Depth Assessment of an Outbreak of Nipah Encephalitis with Person-to-Person Transmission in Bangladesh: Implications for Prevention and Control Strategies.”
American Journal of Tropical Medicine and Hygiene,
80 (1).

Boaz, Noel T. 2002.
Evolving Health: The Origins of Illness and How the Modern World Is Making Us Sick.
New York: John Wiley and Sons.

Boulos, R., N. A. Halsey, E. Holt, A. Ruff, J. R. Brutus, T. C. Quin, M. Adrien, and C. Boulos. 1990. “HIV-1 in Haitian Women 1982–1988.”
Journal of Acquired Immune Deficiency Syndromes,
3.

Breman, Joel G., Karl M. Johnson, Guido van der Groen, C. Brian Robbins, Mark V. Szczeniowski, Kalisa Ruti, Patrician A. Webb, et al. 1999. “A Search for Ebola Virus in Animals in the Democratic Republic of the Congo and Cameroon: Ecologic, Virologic, and Serologic Surveys, 1979–1980.” In
Ebola: The Virus and the Disease,
ed. C. J. Peters and J. W. LeDuc. Special issue of
The Journal of Infectious Diseases
, 179 (S1).

Brown, Corrie. 2001. “Update on Foot-and-Mouth Disease in Swine.”
Journal of Swine and Health Production,
9 (5).

Brownlee, John. 1907. “Statistical Studies in Immunity: The Theory of an Epidemic.”
Proceedings of the Royal Society of Edinburgh,
26.

Burgdorfer, W., A. G. Barbour, S. F. Hayes, J. L. Benach, E. Grunwaldt, and J. P. Davis. 1982. “Lyme Disease—A Tick-Borne
Spirochetosis
?”
Science,
216.

Burgdorfer, Willy. 1986. “The Enlarging Spectrum of Tick-Borne
Spirochetoses
: R. R. Parker Memorial Address.”
Reviews of Infectious Diseases
, 8 (6).

Burke, Donald S. 1998. “Evolvability of Emerging Viruses.” In
Pathology of Emerging Infections 2,
ed. A. M. Nelson and
C. Robert Horsburgh, Jr. Washington: ASM Press.

Burnet, F. M. 1934. “
Psittacosis
in Australian Parrots.”
The Medical Journal of Australia,
2.

———
. 1940.
Biological Aspects of Infectious Disease.
Cambridge: Cambridge University Press.

Burnet, F. M., and Mavis Freeman. 1937. “Experimental Studies on the Virus of ‘Q’ Fever.”
The Medical Journal of Australia,
2.

Burnet, F. M., and Jean MacNamara. 1936. “Human
Psittacosis
in Australia.”
The Medical Journal of Australia,
2.

Burnet, MacFarlane. 1967. “Derrick and the Story of Q Fever.”
The Medical Journal of Australia,
2 (24).

Bwaka, M. A., M. J. Bonnet, P. Calain, R. Colebunders, A. De Roo, Y. Guimard, K. R. Katwiki, et al. 1999. “Ebola Hemorrhagic Fever in Kikwit, Democratic Republic of the Congo: Clinical Observations in 103 Patients.” In
Ebola: The Virus and the Disease,
ed. C. J. Peters and J. W. LeDuc. Special issue of
The Journal of Infectious Diseases
, 179 (S1).

Bygbjerg, I. C. 1983. “AIDS in a Danish Surgeon (Zaire, 1976).”
The Lancet,
1 (2).

Caillaud, D., F. Levréro, R. Cristescu, S. Gatti, M. Dewas, M. Douadi, A. Gautier-Hion, et al. 2006. “Gorilla Susceptibility to Ebola Virus: The Cost of Sociality.”
Current Biology,
16 (13).

Calisher, Charles H., James E. Childs, Hume E. Field, Kathryn V. Holmes, and Tony Schountz. 2006. “Bats: Important Reservoir Hosts of Emerging Viruses.”
Clinical Microbiology Reviews,
19 (3).

Chen, Hualan, Yanbing Li, Zejun Li, Jianzhong Shi, Kyoko Shinya, Guohua Deng, Qiaoling Qi, et al. 2006. “Properties and Dissemination of H5N1 Viruses Isolated during an Influenza Outbreak in Migratory Waterfowl in Western China.”
Journal of Virology,
80 (12).

Chin, William, Peter G. Contacos, G. Robert Coatney, and Harry R. Kimball. 1965. “A Naturally Acquired Quotidian-Type Malaria in Man Transferable to Monkeys.”
Science,
149.

Chitnis, Amit, Diana Rawls, and Jim Moore. 2000. “Origin of HIV Type 1 in Colonial French Equatorial Africa?”
AIDS Research and Human Retroviruses,
16 (1).

Chua, K. B., W. J. Bellini, P. A. Rota, B. H. Harcourt, A. Tamin, S. K. Lam, T. G. Ksiazek, et al. 2000. “Nipah Virus: A Recently Emergent Deadly Paramyxovirus.”
Science,
288.

Chua, K. B., B. H. Chua, and C. W. Wang. 2002. “Anthropogenic Deforestation, El Niño and the Emergence of Nipah Virus in Malaysia.”
Malaysian Journal of Pathology,
24 (1).

Chua, K. B., K. J. Goh, K. T. Wong, A. Kamarulzaman, P. S. Tan, T. G. Ksiazek, S. R. Zaki, et al. 1999. “Fatal Encephalitis due to Nipah among Pig-Farmers.”
The Lancet,
354.

Chua, K. B., C. L. Koh, P. S. Hooi, K. F. Wee, J. H. Khong, B. H. Chua, Y. P. Chan, et al. 2002. “Isolation of Nipah Virus from Malaysian Island Flying-Foxes.”
Microbes and Infection,
4.

Chua, Kaw Bing. 2002. “Nipah Virus Outbreak in Malaysia.”
Journal of Clinical Virology,
26.

———
. 2010. “Risk Factors, Prevention and Communication Strategy During Nipah Virus Outbreak in Malaysia.”
Malaysian Journal of Pathology,
32 (2).

Chua, Kaw Bing, Gary Crameri, Alex Hyatt, Meng Yu, Mohd Rosli Tompang, Juliana Rosli, Jennifer McEachern, et al. 2007. “A Previously Unknown Reovirus of Bat Origin Is Associated with an Acute Respiratory Disease in Humans.”
Proceedings of the National Academy of Sciences,
104 (27).

Churchill, Sue. 1998.
Australian Bats.
Sydney: New Holland Publishers.

Clavel, F., D. Guétard, F. Brun-Vézinet, S. Chamaret, M. A. Rey, M. O. Santos-Ferreira, A. G. Laurent, et al. 1986. “Isolation of a New Human Retrovirus from West African Patients with AIDS.”
Science,
233.

Coatney, G. Robert, William E. Collins, and Peter G. Contacos. 1971. “The Primate Malarias.” Bethesda, Maryland: National Institutes of Health.

Cohen, Philip. 2002. “Chimps Have Already Conquered AIDS.”
New Scientist,
August 24.

Cohn, Samuel K., Jr. 2003.
The Black Death Transformed: Disease and Culture in Early Renaissance Europe.
London: Arnold.

Cornejo, Omar E., and Ananias A. Escalante. 2006. “The Origin and Age of
Plasmodium vivax
.”
Trends in Parasitology,
22 (12).

Cory, Jenny S., and Judith H. Myers. 2003. “The Ecology and Evolution of Insect Baculoviruses.”
Annual Review of Ecology, Evolution, and Systematics
, 34.

———
. 2009. “Within and Between Population Variation in Disease Resistance in Cyclic Populations of Western Tent Caterpillars: A Test of the Disease Defence Hypothesis.”
Journal of Animal Ecology,
78.

Cox-Singh, J., T. M. Davis, K. S. Lee, S. S. Shamsul, A. Matusop, S. Ratnam, H. A. Rahman, et al. 2008.
“Plasmodium knowlesi
Malaria in Humans Is Widely Distributed and Potentially Life Threatening.”
Clinical Infectious Diseases
, 46.

Cox-Singh, Janet, and Balbir Singh. 2008. “Knowlesi Malaria: Newly Emergent and of Public Health Importance?”
Trends in Parasitology,
24 (9).

Crawford, Dorothy H. 2000.
The Invisible Enemy: A Natural History of Viruses.
Oxford: Oxford University Press.

Crewdson, John. 2002.
Science Fictions: A Scientific Mystery, a Massive Coverup, and the Dark Legacy of Robert Gallo.
Boston: Little, Brown.

Crosby, Alfred W. 1989.
America’s Forgotten Pandemic: The Influenza of 1918.
Cambridge: Cambridge University Press.

Curtis, Tom. 1992. “The Origin of AIDS.”
Rolling Stone,
March 19.

Daniel, M. D., N. L. Letvin, N. W. King, M. Kannagi, P. K. Sehgal, R. D. Hunt, P. J. Kanki, et al. 1985. “Isolation of T-Cell Tropic HTLV-III-like Retrovirus from Macaques.”
Science,
228.

Daszak, P., A. A. Cunningham, and A. D. Hyatt. 2001. “Anthropogenic Environmental Change and the Emergence of Infectious Diseases in Wildlife.”
Acta Tropica,
78.

Daszak, Peter, Andrew H. Cunningham, and Alex D. Hyatt. 2000. “Emerging Infectious Diseases of Wildlife–Threats to Biodiversity and Human Health.”
Science,
287.

Davis, Gordon E., and Herald R. Cox. 1938. “A Filter-Passing Infectious Agent Isolated from Ticks.”
Public Health Reports,
53 (52).

De Groot, N. G., N. Otting, G. G. Doxiadis, S. S. Balla-Jhagjoorsingh, J. L. Heeney, J. J. van Rood, P. Gagneux, et al. 2002. “Evidence for an Ancient Selective Sweep in the MHC Class I Gene Repertoire of Chimpanzees.”
Proceedings of the National Academy of Sciences,
99 (18).

De Kruif, Paul. 1932.
Men Against Death.
New York: Harcourt, Brace and Company.

Derrick, E. H. 1937. “Q Fever, A New Fever Entity: Clinical Features, Diagnosis and Laboratory Investigation.”
The Medical Journal of Australia,
2 (8).

Desowitz, Robert S. 1993.
The Malaria Capers: More Tales of Parasites, People, Research and Reality.
New York: W. W. Norton.

Diamond, Jared. 1997.
Guns, Germs, and Steel: The Fates of Human Societies.
New York: W. W. Norton.

Other books

Asylum by Jason Sizemore
The Cat Who Talked to Ghosts by Lilian Jackson Braun
Slipping the Past by Jackson, D.L.
Metal Urge by Wilbourn, E.D.
Snowbound in Montana by C. J. Carmichael
La caja de marfil by José Carlos Somoza
Miss Lizzy's Legacy by Peggy Moreland
Los reyes de la arena by George R. R. Martin